Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951811.1_cds_XP_016491725.1_82012
CDS Infomation

[gene=LOC107811333] [db_xref=GeneID:107811333] [protein=something about silencing protein 10-like isoform X2] [protein_id=XP_016491725.1] [location=join(1534..1648,2758..2849,2985..3054,3713..3849,4057..4197,4288..4427,5460..5547,6557..6733,8094..8258,8403..8477,8708..8847,8956..9073,10020..10273,10549..10612,10714..10782,10874..10999)] [gbkey=CDS]
Sequence

ATGGGAAAGAAAGCAGGAAAGTTCAAAAAGAAGGAAACCAACAACGCTCCAAAAAAAGCA
AAACGTGATTTTTACAATGAAGATGATGATATGATGAATGATGCCATCGATGCCTTTCAT
GAACAGAGAGACATGATCCCACTGAATGTTAATGAAGATGATGCAGAGTCGGATGAAGAT
AATGAGCATCCTGTGTATGATCTTAAGGAGGATGAAGATGAGGAGGATGAAGATGACGAC
CTTGATGATGCTGAACTTACTGGCCTTGGTGCTAAAATTGCAAGGACACAGAAATATTTA
CGAGCTACAATGGGCGGGGTTGAGGATGAAATGCACGATGAAGCTGAAGAGGAGAAAGAA
GAGAGGCCTCTGTGGGGAAGAGGAAAAAATATCTATTATTATCAAGATAAGCAGGGTCCC
GAGCAAGAGTCGAGTGATGAGGACCTTATCGCGGAGGAAGAGGCAGAGGTCTTGAGATTG
CAGCAGAAGAAAGCTAAATCCTTATCTGCAGAGGATTTTGGTCTTGAAGATGATGAAGAG
GAGCTTACATTGGAGGAAATTTTGGCCCAAGGAAAATCTGGATTAGCAGTTTCTGCAGAC
GGAGAAGCCAAAAATGAAACTGGCACTGCTTACGAGGAAGTGCAGAAGGATTTGAATGCT
TTGACGAAAGAAGAGCAAATGGATGTTGTCTATAGTTCTGCACCTGAATTGGTTGGTTTG
CTATCTGAGCTTAGTGAAGCGCTTGAGCAGCTCGATAACAAAGTTAATCCTATACTCAAC
AAGATTAATGGAGAGAATATGATAAAAGGTGGGATGCACTACATTGAGGTGAAGAAGCTA
CTTCTGCTGTCATATTGCCAAGCTATCACCTTCTATCTTCTTCTCAAATCCGAGGGACAA
CCAGTGCGTGATCATCCAGTCATTTCACGCCTTGTGGAGATCAAGAATTTGTTGAATAAG
ATGAAAGAACTTGATGGAAATCTTCCTTCTGAACTAGAAGACTTTTTACACAAGAATGTT
GATAATGTAACTGGTGTAAAGTTGGCGGGAAGTAACTTGGATTCTGAACCTCTCCCCATT
AGTCACAAGCCTTCTGTGGCATTAGCTGATGTTCAAGAAACAGAGCCTCATGAAGCTGAG
TTGGTGGAGGCAAATGGTTTAAAGAGTCAACAGAAAAACGAATCAAAACGCAAACGTCAG
GATGATCAAGTTGGTATCCAGAGCAGGGAAATGTTAAAAGTGAGAGCTGACCTTGAGGAA
AAATGGAAGCAGACAGGTGTCTTAAGTTCCATTGCACGAAAACATGAAAAACAAAACAAG
CGCTTGCGACTACTGAATGGGCAGTTGGCAACACCTGATGATTTTGATGATGATGCCATG
GTTGCTGGAGATGATCGTGAGATACGGAGTTTAAATAAGCTGTCTAGGCTTGTGACTCCT
CAAGTAGCGAGACCCAAGGTAATTTCTGGTGATGATGATTTACCAAAGCGAGACGACATT
GGAGAAAGGAGAAGAAAGCATGAACTAAGAGTTCTAGCTGGAGCCGGAGTTGAACCTTCT
GATGATGTTGAAGATGAGCCCGGTAACCATGCAAGTGATGATGATGTTGCTAGTTCTGAT
GATGGTGAAATGGACTCAGATTTGGAATTCTATAAAGAAGTGGAAAAGCAACATTCAGCT
AAGCTTGCTGCTAAAGAAAAGATGTATTCCAGAGCCCCGGTTATTTCGTCGACAACTGAA
ACGCTTGTGGATGGGAAGCGCCAGATAAATTACCAGATGGAGAAGAACAGGGGACTTACT
CGTCATCGTAACAAGCTAACTAAAAATCCAAGGAAGAAGTACAGGGGAAAACATGAGAAG
CAGCAGAAACGTAGGAAAGGACAAGTCCGCGATATCAAGAAGCCAAGTGGTCCTTATGGT
GGAGAAACTACAGGAATTAATGCTGCTAGTAGGCGAAGTATCAGATTATAG

Peptide Sequence

PEP ID

XP_016491725.1
PEP Infomation

PREDICTED: something about silencing protein 10-like isoform X2 [Nicotiana tabacum]
Sequence

MGKKAGKFKKKETNNAPKKAKRDFYNEDDDMMNDAIDAFHEQRDMIPLNVNEDDAESDED
NEHPVYDLKEDEDEEDEDDDLDDAELTGLGAKIARTQKYLRATMGGVEDEMHDEAEEEKE
ERPLWGRGKNIYYYQDKQGPEQESSDEDLIAEEEAEVLRLQQKKAKSLSAEDFGLEDDEE
ELTLEEILAQGKSGLAVSADGEAKNETGTAYEEVQKDLNALTKEEQMDVVYSSAPELVGL
LSELSEALEQLDNKVNPILNKINGENMIKGGMHYIEVKKLLLLSYCQAITFYLLLKSEGQ
PVRDHPVISRLVEIKNLLNKMKELDGNLPSELEDFLHKNVDNVTGVKLAGSNLDSEPLPI
SHKPSVALADVQETEPHEAELVEANGLKSQQKNESKRKRQDDQVGIQSREMLKVRADLEE
KWKQTGVLSSIARKHEKQNKRLRLLNGQLATPDDFDDDAMVAGDDREIRSLNKLSRLVTP
QVARPKVISGDDDLPKRDDIGERRRKHELRVLAGAGVEPSDDVEDEPGNHASDDDVASSD
DGEMDSDLEFYKEVEKQHSAKLAAKEKMYSRAPVISSTTETLVDGKRQINYQMEKNRGLT
RHRNKLTKNPRKKYRGKHEKQQKRRKGQVRDIKKPSGPYGGETTGINAASRRSIRL

Transcript Sequence

Gene sequence data has not been registered.